Publications
Sanford, E.J.,Smolka, M.B A field guide to the proteomics of post-translational modifications in DNA repair. Proteomics (2022)
Lanz, M.C., Yugandhar, K., Gupta, S., Sanford, E.J., Faça, V.M., Vega, S., Joiner, A.M.N., Fromme, J.C., Yu, H., Smolka, M.B. In-depth and 3-dimensional exploration of the budding yeast phosphoproteome. EMBO Rep (2021)
Sanford, E.J., Smolka, M.B. Fe-nta microcolumn purification of phosphopeptides from immunoprecipitation (ip) eluates for mass spectrometry analysis. Bio-protocol (2021)
Yugandhar, K., Zhao, Q., Gupta, S., Xiong, D., Yu, H. Progress in methodologies and quality-control strategies in protein cross-linking mass spectrometry. Proteomics (2021)
Yugandhar, K., Wang, T.Y., Leung, A.K., Lanz, M.C., Motorykin, I., Liang, J., Shayhidin, E.E., Smolka, M.B., Zhang, S., Yu, H. MaXLinker: Proteome-wide Cross-link Identifications with High Specificity and Sensitivity. Mol Cell Proteomics (2020)
Yugandhar, K., Wang, T.Y., Wierbowski, S.D., Shayhidin, E.E., Yu, H. Structure-based validation can drastically underestimate error rate in proteome-wide cross-linking mass spectrometry studies. Nat Methods (2020)
Yugandhar, K., Gupta, S., Yu, H. Inferring Protein-Protein Interaction Networks From Mass Spectrometry-Based Proteomic Approaches: A Mini-Review. Comput Struct Biotechnol J (2019)